PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05586
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 143aa    MW: 15935.8 Da    PI: 11.3383
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05586genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-201767155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++++GVr ++ +gr++AeIrdp   g++ r++lg+f+tae Aa+a++aa+++++g
  PEQU_05586 17 TQFRGVRKRP-WGRYAAEIRDP---GRKIRVWLGTFDTAEAAARAYDAAAREFRG 67
                579*******.**********8...556************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.86E-161774No hitNo description
SMARTSM003806.2E-361881IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-211876IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.6E-311875IPR001471AP2/ERF domain
PfamPF008475.7E-131867IPR001471AP2/ERF domain
PROSITE profilePS5103223.4591875IPR001471AP2/ERF domain
PRINTSPR003671.5E-101930IPR001471AP2/ERF domain
PRINTSPR003671.5E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MPPRSKLHCA AAAEKETQFR GVRKRPWGRY AAEIRDPGRK IRVWLGTFDT AEAAARAYDA  60
AAREFRGSRA KTNFSFSDAE HESSGAVPFD LNRGGDARFM FRAFRNEMAA AAQPLYFFGN  120
FRHSGGARFL SRRDGSIGHV SSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-191576264ATERF1
3gcc_A5e-191576264ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009413364.18e-34PREDICTED: ethylene-responsive transcription factor 4-like
SwissprotQ9FE671e-32ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLM0TQT68e-34M0TQT6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P15830_0012e-33(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.19e-19erf domain protein 9